Multiscale investigation of biomolecular systems dynamics
American Institute of Chemical Engineers (AIChE) Annual Meeting, San Francisco, 3 Kasım 2013
GÜR MERT,ZOMOT ELİA,BAHAR İVET
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Computational design of new peptide inhibitors for amyloid beta aggregation in Alzheimer s disease application of a novel methodology
American Institute of Chemical Engineers (AIChE) Annual Meeting, San Francisco, 3 Kasım 2013
GÜR MERT,ESKİCİ GÖZDE
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Global motions of proteins observed in micro to milliseconds simulations concur with Anisotropic Network Model predictions
Membrane Protein Structural Dynamics Consortium’s Annual Meeting, 29 Nisan 2013
GÜR MERT,ZOMOT ELİA,BAHAR İVET
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Transition pathways of proteins explored by combining Molecular Dynamics simulations and Monte Carlo sampling of collective modes
Biophysical Society 56th Annual Meeting, Vol. 102, No. 3, 25 Şubat 2012, s. 450
GÜR MERT,MADURA JEFFRY,BAHAR İVET
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Transition pathways of Dopamine transporters explored by combining Molecular Dynamics simulations and Monte Carlo sampling of collective modes
Membrane Protein Structural Dynamics Consortium’s Annual Meeting, 1 Mayıs 2012
GÜR MERT,MADURA JEFFRY,BAHAR İVET
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Transition pathways of enzymes explored by combining the Anisotropic Network Model
Albany 2011: Conversation 17, 14 Aralık 2011
GÜR MERT,BAHAR İVET
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Exploring the Conformational Transitions of Biomolecular Systems Using a Simple Two-State Anisotropic Network Model
PLoS Computational Biology, Vol. 10, No. 4, Nisan 2014, s. 1003521, ISSN: 1553-7358
DAS AVİSEK, GÜR MERT, CHENG MARY HONGYİNG, JO SUNHWAN, BAHAR İVET, ROUX BENOİT
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Global Transitions of Proteins Explored by a Multiscale Hybrid Methodology: Application to Adenylate Kinase
Biophysical Journal, Vol. 105, No. 7, Ekim 2013, s. 1643-1652, ISSN: 0006-3495
GÜR MERT, MADURA JEFFRY D, BAHAR İVET
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Global motions exhibited by proteins in micro- to milliseconds simulations concur with anisotropic network model predictions
The Journal of Chemical Physics, Vol. 139, No. 12, Eylül 2013, s. 121912, ISSN: 0021-9606
GÜR MERT, ZOMOT ELİA, BAHAR İVET
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Statistical thermodynamics of residue fluctuations in native proteins
JOURNAL OF CHEMICAL PHYSICS, Vol. 130, No. 9, Mart 2009, s. 95103, ISSN: 0021-9606
YOĞURTÇU OSMAN NURİ,GÜR MERT,ERMAN BURAK
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Microseconds Simulations Reveal a New Sodium-binding Site and the Mechanism of Sodium-coupled Substrate Uptake by LeuT
JOURNAL OF BIOLOGICAL CHEMISTRY, Vol. 290, No. 1, Ocak 2015, s. 544-555, ISSN: 0021-9258
ZOMOT ELİA,GÜR MERT,BAHAR İVET
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Interplay between arginine methylation and ubiquitylation regulates KLF4-mediated genome stability and carcinogenesis
Nature Communications, Vol. 6, No. 1, Aralık 2015, s. 8419, ISSN: 2041-1723
DONG HU,GÜR MERT,ZHOU ZHUAN,GAMPER ARMİN,HUNG MİENCHİE,FUJİTA NAOYA,LAN Lİ,BAHAR İVET,WAN YONG
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Energy landscape of LeuT from molecular simulations
JOURNAL OF CHEMICAL PHYSICS, Vol. 143, No. 24, Aralık 2015, s. 243134, ISSN: 0021-9606
GÜR MERT,ZOMOT ELİA,CHENG MARY HONGYİNG,BAHAR İVET
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Quasi-harmonic fluctuations of two bound peptides
Proteins: Structure, Function, and Bioinformatics, Vol. 80, No. 12, Aralık 2012, s. 2769-2779, ISSN: 0887-3585
GÜR MERT,ERMAN BURAK
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Quasi-harmonic analysis of mode coupling in fluctuating native proteins
Physical Biology, Vol. 7, No. 4, Aralık 2010, s. 46006, ISSN: 1478-3975
GÜR MERT,ERMAN BURAK
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Anharmonicity, mode-coupling and entropy in a fluctuating native protein
Physical Biology, Vol. 7, No. 4, Aralık 2010, s. 46005, ISSN: 1478-3975
KABAKÇIOĞLU ALKAN,YURET DENİZ,GÜR MERT,ERMAN BURAK
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Combining Optimal Control Theory and Molecular Dynamics for Protein Folding
PLoS ONE, Vol. 7, No. 1, Ocak 2012, s. 29628, ISSN: 1932-6203
ARKUN ZİYA YAMAN,GÜR MERT
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Statistical thermodynamics and mode analysis of residue fluctuations in native proteins
Gordon Research Conference (GRC) Computer Aided Drug Design, 19 Temmuz 2009
GÜR MERT,ERMAN BURAK
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Coupling between energy and residue position fluctuations in native proteins
2010 5th International Symposium on Health Informatics and Bioinformatics, 20 Nisan 2010
GÜR MERT,ERMAN BURAK
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Protein folding using coarse grained optimal control and Molecular Dynamics
18th International Federation of Automatic Control (IFAC) World Congress, 28 Ağustos 2011
ARKUN ZİYA YAMAN,GÜR MERT
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